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DGGE及T-RFLP分析光照下电位对细菌群落的影响
摘要点击 2137  全文点击 958  投稿时间:2013-09-29  修订日期:2013-12-14
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中文关键词  变性梯度凝胶电泳  末端限制性片段长度多态性  细菌群落  电位  光照
英文关键词  DGGE  T-RFLP  bacterial community  potential  illumination
作者单位E-mail
吴义诚 中国科学院城市环境研究所, 厦门 361021 ycwu@iue.ac.cn 
邓欢 南京师范大学地理科学学院, 南京 210023  
肖勇 中国科学院城市环境研究所, 厦门 361021  
赵峰 中国科学院城市环境研究所, 厦门 361021 fzhao@iue.ac.cn 
中文摘要
      电位和光照能影响生物电化学系统中产电光合微生物的富集和生长,为了明确电位对细菌多样性的影响,采用变性梯度凝胶电泳(denaturing gradient gel electrophoresis,DGGE)和末端限制性片段长度多态性(terminal restriction fragment length polymorphism,T-RFLP)两种方法分析光照条件下电位对电极生物膜细菌群落多样性的影响,实验设置0、0.2、0.4、0.6 V(vs. Ag/AgCl)4个电位. 结果表明,0.6 V(vs. Ag/AgCl)下电极生物膜细菌DGGE条带数量较其他处理明显降低,对条带的测序结果显示不同电位下电极生物膜细菌主要属于α-变形菌纲(α-Proteobacteria)、β-变形菌纲(β-Proteobacteria)和梭菌纲(Clostridia). 而0.2 V(vs. Ag/AgCl)处理下末端限制性片段(terminal restriction fragment,T-RF)的数量最高,片段数量随电压进一步升高呈现降低趋势. 虽然DGGE和T-RFLP两种方法分析结果有一定差异,但都能反映电位对电极生物膜细菌群落多样性影响显著,高电位降低了细菌多样性.
英文摘要
      Potential and illumination regulate the acclimation and growth of exoelectrogenic photosynthetic bacteria in bioelectrochemical systems. To understand the influence of potential on the bacteria community diversity under illumination, PCR-based molecular ecological techniques including denaturing gradient gel electrophoresis (DGGE) and terminal restriction fragment length polymorphism (T-RFLP) were applied to evaluate the bacteria community diversity of biofilm on working electrode. Four potentials of 0, 0.2, 0.4 and 0.6 V (vs. Ag/AgCl) were applied to the working electrode. The DGGE results showed that the band number of the biofilm at 0.6 V was dramatically lower than those at other potentials. The sequencing analysis of these bands showed that most of them belonged to classes of α-Proteobacteria, β-Proteobacteria and Clostridia. The T-RFLP results showed that the number of T-RFs was the largest at 0.2 V and then decreased with increasing potentials. Although the application of DGGE or T-RFLP resulted in different bacterial diversities, both techniques revealed that potential dramatically affected the bacterial diversity and high potential decreased the diversity.

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